Tresor

Changelog

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Installation
Tutorial

Tresor

Home
About
Changelog
Contact
Installation
Tutorial
Tutorial
- 1. Sequencing library
  1. Sequencing library
- 2. Bead synthesis
  2. Bead synthesis
- 3. Count matrix
  3. Count matrix
- 4.read simulation
  4.read simulation
  - 4.1 Amplification
    4.1 Amplification
    
    4.1.1 Overview
    
    4.1.2 Single locus
    
    4.1.3 Bulk RNA seq
    
    4.1.4 Single cell RNA seq
  - 4.2 PCR cycle
    4.2 PCR cycle
    
    4.2.1 Overview
    
    4.2.2 Single locus
    
    4.2.3 Bulk RNA seq
    
    4.2.4 Single cell RNA seq
  - 4.3 PCR error
    4.3 PCR error
    
    4.3.1 Overview
    
    4.3.2 Single locus
    
    4.3.3 Bulk RNA seq
    
    4.3.4 Single cell RNA seq
  - 4.4 Sequencing error
    4.4 Sequencing error
    
    4.4.1 Overview
    
    4.4.2 Single locus
    
    4.4.3 Bulk RNA seq
    
    4.4.4 Single cell RNA seq
  - 4.5 UMI length
    4.5 UMI length
    
    4.5.1 Overview
    
    4.5.2 Single locus
    
    4.5.3 Bulk RNA seq
    
    4.5.4 Single cell RNA seq
  - 4.6 Sequencing depth
    4.6 Sequencing depth
    
    4.6.1 Overview
    
    4.6.2 Single locus
    
    4.6.3 Bulk RNA seq
    
    4.6.4 Single cell RNA seq
  - 4.7 Customised
    4.7 Customised
    
    4.7.1 Overview
    
    4.7.2 Single locus
- Appendix
  Appendix
  - Sequencing technology
  - Error type

Changelog

0.1.0 (06.20.2024) -> 1st release
0.1.1 (05.21.2025) -> fix bugs and anchor
0.1.2 (05.25.2025) -> estimate errors profiles during bead synthesis

Copyright © 2024 Jianfeng Sun

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