3.1 Overview

Tresor uses a count matrix as input to generate reads observed at the bulk and single-cell levels. It can use a count matrix read from a h5 file or generated by an external tool, such as SPsimSeq tool¹.

Solution

API	Function
ts.spsimseq_bulk	bulk RNA-seq
ts.spsimseq_sc	scRNA-seq

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1. Alemu Takele Assefa, Jo Vandesompele, Olivier Thas, SPsimSeq: semi-parametric simulation of bulk and single-cell RNA-sequencing data, Bioinformatics, Volume 36, Issue 10, May 2020, Pages 3276–3278, https://doi.org/10.1093/bioinformatics/btaa105 ↩