2. Unique
The UMI count deduplicated by the Unique
method is interpreted as the number of unique UMIs observed at a single locus. Thus, consider there is a UMI graph containing non-repeated UMI nodes of 7.
graph_adj_mclumi = {
'A': ['B', 'C', 'D'],
'B': ['A', 'C'],
'C': ['A', 'B'],
'D': ['A', 'E', 'F'],
'E': ['D', 'G'],
'F': ['D', 'G'],
'G': ['E', 'F'],
}
Deduplicated UMI count
There are 7 nodes, and therefore, the deduplicated count of UMIs from 7 unique UMIs is 7 at the single locus.